CDS

Accession Number TCMCG078C19515
gbkey CDS
Protein Id KAG0484588.1
Location complement(join(18910555..18910650,18910753..18910831,18911032..18911151,18913344..18913444,18913596..18913733,18915081..18915176,18915279..18915401,18915504..18915647,18916240..18916377,18916451..18916624,18933043..18933207,18941112..18941189,18941261..18941387,18941493..18941581,18941780..18941852,18941924..18941979,18942074..18942244,18942395..18942508,18942576..18942668,18952292..18952489,18953381..18953458,18954116..18954266,18954492..18954544,18954631..18954828,18957973..18958096,18966666..18966785,18966868..18966998,18976432..18976476))
Organism Vanilla planifolia
locus_tag HPP92_008667

Protein

Length 1090aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633886, BioSample:SAMN14973820
db_source JADCNL010000004.1
Definition hypothetical protein HPP92_008667 [Vanilla planifolia]
Locus_tag HPP92_008667

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTAATGCACACATTGATGCACCTTCAGTAGCTTCTGTTGAGGTTTATGACATGCGATTTGAGCTTAATGAAGTTGAAGCAAGAATGGAAAGATATCCATCTACAATATCTTACCTCAACTTGCTAAATAGTTTGATTTCTCAAGAAACGGATGTGAGTGATAGAGGGCTAAGGTTTGTGGGCATATTTAGATTTATTTATGATCAAGTTTTTGGGCCTTTTCCTCTGAGAGCTTATGCTGATCCTAAAGAAAAATGGCAGTTGGTTATTGCTTGCCTGGAGCATTTCCATTTGGTCCTCAAGATGTATGACTTGCGGGATGAGGATATTATTAATGCTGTTGACATTTCCCAGCCATCGAGTGTCCCTCCAGCTTCCAACCTTGAAATTCAGTTCCCCATATTAGAATTGTTGAAAGACTTCATGAGTGGAAAAGTTGTTTTTCGCAACATAATGAGTATAATCTTACTTGGTGTGAACATGCTCATTAATGAGCGAACCAGTCATACGTACGGCTTGCTTTTGGAGAAAGCTGTTCATCTTTCATTAGAGGTTATTATTCTTGTTTTTGAAAGAGATCTATTCCTTGCGGAGTTTTGGCGCCCGTTGTATCAGCCTTTGGATGTTATATTATCTCAAGATCATACTCAGATTATTTCCTTGCTGGACTCAAGGATTGTTGGACTTGTACAGTTGTTACTGAAAGCAAATGCAGCAAAATGTCTAATTGAGGATTATGCTGCTTGTCTAGAATCCCGTTTTGATGAGTCTGCGCCTGTTGAGAATACAAAAGATGATGCTGGTGTTCTAATAATGCAGCACTTGGACAGCTTTGGTATTGCCCAACTCCCCCCAAGAACAAGTAAACTGGCTCTTAGAATCAGTACACTCCATCAGCGAGCATGGCTTTTGAAATTGCTAGCTTTTGAATTGCATTCAGCTGATATGGCTGATCCTTTGCACAAGGAGTCTTGCTTGGCTATCATTCGGAAGATTTTTGCTCAACATTCTGAAGTGAACTATGGTGAACCGAATTCCTCCAAAACCTTTGTTACACATCCTTTTGATGCTGTTAATGGAACAAGCAAAATAAAGGCTCTAGAATTGCTTGAGATTGTGCATTTTAAACCTCCTGACATTGGCTTGAGATATCCCCAGTTCATTTTGAATACGAAGTATCATAAGAAGGTGGAAGACATTCTTAGTAATTCTGCAATTTCTGAGATGGGTGGTGTCTATTTTTATTCGGAGCGAGGTGATAGGCTAATTGATCTTGATGCATTTCATGATGCACTTTGGCAGATGCTTAAATTCTCTACCCAGCCTGGAGATTCCCCTTACAATATTCCAGATAAGGGTGAAATAAGTGAGGTGATTCAGAAATTACTAAGATGGGCTTGGAAGTACAACAAGAATCTAGAAGAACAAGCAGCCCAGCTCCATATGTTGACTGGCTGGTCTCATGTAGTTGAGGTGTCTGTATCAAGGAAAGCCTTATTTATTGAGGATCATTCCCAGTTCTTGTTTGAGTTGCTTGATGCTTCCTTAAGTGTATCTGCCTCTCCAGATTGTTCTTTGAAGATGGCATTGGTACTAAGCCATCTGCTACCAAATGGAGCATGTCATTCTATACTTCTCAAGCTAATAGTGGCTATTCTCAGAACTGAATCATCGGAAGCATTGAGAATACGGCAGTATGCATTGCTCCTTAGTTACTTTCAGTACTGTCGTAATGTGCTTGATCCTGAAATTCCAAGATCTGTGATTGGATTCTTGGTCAGTGAGGACCAAGGAGATGACGAGCTAAATTTGCAAAAGATTGACAAAGAGCAAGCTGAACTAGCTAGAACCAATTTTGCCATACTAAAAAAGGAAGCTGAAGCAATGATAGACGTGGTTTCAAAGGATGCCATTGAAGGCAGTGAGGTTCTCAAGGCAATGGCATTTTATGCGTTAGACACATTTATTGATATTGATGAAGAAAAGCTTTTACTGAGCCAACTTCAGAGCAAAGGAATACCAAGGTCAGCTCTACTTGAAATCAGTAACTTCTCTGTTAAGGATGGTGGTAGGTGCTCTGTAGACTCTTTGCAACATTTATGCACACTTGAGGCTGAATTGGCTATGCTGTTGAGGATCAGCCACAGATACAACAAGCATGGCGCTCAACTTCTTTTGTCAATAGGTGCTTTGGAGCATCTTAGGGCATGCAGGGCTCCTGAGTTGAAATCCAAGGGATTTTCTAGGCATTGTGGTAATATGGTTGGAATGGATATAGCTGGAGAGTTTGCAAAGCGAAATGTTCTTGTGACCTCGATTTTAAGGCTTGTTTCTTGTTTGACATCTTTGGTGGACTCTTTAGAATTTCTAGAGGTTAAAAATAAAATTGTTCGGGATGTCGTAGACTTTATCAAGCATCATCAGTTATTTTTTGATCAGATCCTAAGTGAGGATATCTCACTAGCTGATGAAGTTACTTTGGAACAGATTGATCTTGTTGTCTCAATACTTAGTAGGGTTTGGCCATATGAAGAGAATGATGGGCATGGTTTCCTGCAAGGGATTTTCAGAATGATTAATTTTGTTTTCAAGCTTGATGTTGGCTCAAATGGTATTGGCCACTTTTCTGACCCAGTTGAGAAAAAAAGAATGTGGGAGGTGGTCATGTTCAAGCTGTGTTTCAGTCTTGCCTCATATCTTTATTTTCTGATAACTAAGAAGCTTATGAGACTACAGGTCTCAGATATAACTGGCAGTCCAGGTGATTCAATTGCCCAACAGGTGCCTACGTTAGACACTGTGGTGTATCTTCTTAGTTCAGTAACAGCAGCTTTGGTCAGAGCTGGTGAAGAAAAAGTCTTTTTTCTTAACAAGATTCAGAATATCAATGAATTATCAAGGCAGGAGGTTGACGAAATTATTGATGTGTGCATAAGACGAGATTATCTCTCCCCTTTTGATAGCATTCAGAAAAGGAGGTATGTCGCAATGGTGGAAATGTGTCGCATAATTGGGATTAGGGATCAGCTCGTCATTGTGCTTCTTCAGCTTGCTGAGTGTCTTTTCAACATTCTTCTTATTCATCTTCAAGATAGTAACTTTGATTCTGGAGATATTTCTCTTTTATGTGAAAAGTTACATCCAACTTTGGAAAAGCTGGAGCATTTACGGGAGGATAGATTGGGACACGATCTCAAGCTTTTTCACAGAACAATCAATATGCTAAAGGAATTATCGATAAGAAATCTAGCTCTGAAAGGCATATCATAG
Protein:  
MLNAHIDAPSVASVEVYDMRFELNEVEARMERYPSTISYLNLLNSLISQETDVSDRGLRFVGIFRFIYDQVFGPFPLRAYADPKEKWQLVIACLEHFHLVLKMYDLRDEDIINAVDISQPSSVPPASNLEIQFPILELLKDFMSGKVVFRNIMSIILLGVNMLINERTSHTYGLLLEKAVHLSLEVIILVFERDLFLAEFWRPLYQPLDVILSQDHTQIISLLDSRIVGLVQLLLKANAAKCLIEDYAACLESRFDESAPVENTKDDAGVLIMQHLDSFGIAQLPPRTSKLALRISTLHQRAWLLKLLAFELHSADMADPLHKESCLAIIRKIFAQHSEVNYGEPNSSKTFVTHPFDAVNGTSKIKALELLEIVHFKPPDIGLRYPQFILNTKYHKKVEDILSNSAISEMGGVYFYSERGDRLIDLDAFHDALWQMLKFSTQPGDSPYNIPDKGEISEVIQKLLRWAWKYNKNLEEQAAQLHMLTGWSHVVEVSVSRKALFIEDHSQFLFELLDASLSVSASPDCSLKMALVLSHLLPNGACHSILLKLIVAILRTESSEALRIRQYALLLSYFQYCRNVLDPEIPRSVIGFLVSEDQGDDELNLQKIDKEQAELARTNFAILKKEAEAMIDVVSKDAIEGSEVLKAMAFYALDTFIDIDEEKLLLSQLQSKGIPRSALLEISNFSVKDGGRCSVDSLQHLCTLEAELAMLLRISHRYNKHGAQLLLSIGALEHLRACRAPELKSKGFSRHCGNMVGMDIAGEFAKRNVLVTSILRLVSCLTSLVDSLEFLEVKNKIVRDVVDFIKHHQLFFDQILSEDISLADEVTLEQIDLVVSILSRVWPYEENDGHGFLQGIFRMINFVFKLDVGSNGIGHFSDPVEKKRMWEVVMFKLCFSLASYLYFLITKKLMRLQVSDITGSPGDSIAQQVPTLDTVVYLLSSVTAALVRAGEEKVFFLNKIQNINELSRQEVDEIIDVCIRRDYLSPFDSIQKRRYVAMVEMCRIIGIRDQLVIVLLQLAECLFNILLIHLQDSNFDSGDISLLCEKLHPTLEKLEHLREDRLGHDLKLFHRTINMLKELSIRNLALKGIS